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Background
Inserts on UCSC
Heatmaps
Tables
MuLV database
Co-mutation Analyses
Select a subset of mice (specify late) and a locus of interest. This will select clonal inserts at that locus and then identify which other regions are more or less frequently mutated than expected by chance.
Chromosome of Region
Window of Region
Number of peaks
100
200
500
Chromosome
Position
Sample ID
Mouse ID
Fragments normalised clonality (from 0 to 1)
Reads normalised clonality (from 0 to 1)
Background
NA
BALB/CxBALB/C
C57BL/6xBALB/C
C57BL/6xC57BL/6
Genotype
WT
Emu-BCL2-22
VAV-BCL2
Stage
All
Early
Late
Gender
Female
Male
Tissue
Spleen
Thymus
Lymph Node
BM
Flow cytometry populations
Less than
Greater than
CD19+
CD19-CD5-
CD19-CD5+
CD19-CD5+CD4+CD8a-
CD19-CD5+CD4+CD8a+
CD19-CD5+CD4-CD8a+
CD19-CD5+CD4-CD8a-